Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940826.1_cds_XP_016484925.1_75894
CDS Infomation

[gene=LOC107805404] [db_xref=GeneID:107805404] [protein=chloroplast sensor kinase, chloroplastic-like] [protein_id=XP_016484925.1] [location=complement(join(26695..26949,27185..27458,27903..28096,28534..28626,28774..28842,28956..29021,29359..29655,29735..29896,32483..32935))] [gbkey=CDS]
Sequence

ATGCTGCTCTCTGCATTTCCTCCGCAGAATCCATTACCATTATCCAATCCCACTCACCCA
CATCCACCCCCGCCCCATCACCACCAACATACCCTCCTCTTCTCCCCTACCTTCCAAAAA
AAAGCAACTACAGTTACTCACGCTTCTTCACAGAGACTACCACCACTTGCTCTCACCACT
GCCGCCGCTACCTCCTCCACCTATACTTCTCTCCGGCACGTCAGCGGCACGTGCTCCGAT
GATGATTCCCATGGCGACGGAGACGGTATGGTTTCGTCGGCGTCAGCTGTTGCTGCGGCC
ATACGGAATGCTTCGACGTCACCGGTGGAGTTCGTTCAGAGGATTGAAAAGGATGACGGA
GGCTTGGTATTACCGAGTGCTGATTTCAAGAGACTTTGCGTTGAACAATTCGACCTCTTT
CGCCGTATTGTCCATCCTCAGTCTGTTCTTTCCGTTTATGTAAGACCAGCAGGTAGTTAT
GTAATGGACCAGCTAGAGTTGCGTCGCATTACTTTACATCCACATGTCAATGCGACTGAT
CTTGTGATTCTAACTGGTAACTTTAGCATTCCTGCGGGCTTAAGAGCGGCTGAAGCAGCT
CTTTCGAGACAAGAGGCAGAATTACTTCCTGAGCTTGGAGCTATGGTGTTCCCTATGGTA
AAACACCCATTTATTGTTGGGTTTTTAGTTGCGGAACTCCCAAGAACTGCATTTGATAAG
GGTGGGTTTAATGTGAAAGCATGGCCTGGCCAGGAGGAGTTTTATTCCTTGCCTCCTAGC
ATGGATTTGAAATCGTTGAATATCCAAACTTCAACTGACCACTCCTTTGAGATGTTAAAA
TTCACAGCTGAGCAAAGATTAAATGCTATAAATATTTCCCGTTCACTTGCAATGGCTTAT
GTCATGGATCAGAAAGCAATTTTGCTCCAACAGTCCACCTGGCAAAATAATATCAGGATG
AGCAATTTGGTTGAGCAAATTCGGGGTTCTCTTTCCAGCATTCGAACTTTGAGTAAGATG
TTATCTTCTCAGATTAGAAAGAGTGAGATTTCATATGATATTGTTCAAGATATCTTGGAG
CAAGGTGATTGCCTGAGTGATACTCTTAAGGGACTCCAGGATGCTGTTTCCCTAACAAAG
GCTAATATAATGCGTTATAGTGAAGAAACATTGAAAAAGATGCCTAAATCAACTCATCCT
GGTCGTGAGTCGGTGAGGTCTCAGTTATCCAGTAACTTGTCTGAGAAGCTAGAATCTCTC
TCTTTAAAATCCAAGGATCTAGAAATGCCAATGCCACCTCTTGCTCTAGCACCTTTACAC
CAGGAAGGAATCAGACCATGCAGTGTTTCTGATGTACTGGTGGATTTGGTGGGAGCAGTG
GCGCCTTTAGCGCACGAGCAGAGGAGAGCTGTTTTACTTTCTGAGGTTCCGAGATCTTTA
CAGGTGCCCATTGAAGAGCCTGCTTTACGACAGGCATTGGGTAATCTGATCGAGGGTGCC
TTATTGCGTATACAAGCTGGTGGAAAGGTTGAAATTGTTGCCACTGGAGCACCTGCAGGG
GGTGCTCTTGTTATAATTGATGATGATGGCCTTGATATGCACTATATGACACAGATGCAC
TCTCTAGCACCTTTTGGGGCAGATCTATTTTCTGAAGATAAGGTAGAGGATAACATGACA
TGGAATTTTGTGGCTGGACTAACTGTTTCACGAGAAATATTGGAGAGTTATGGATGTGTC
GTGCGGGTGATCTCACCAAGATTAACAGATGCTGCAATTGGAACTGGGGGAACCCGTATA
GAACTCTGGTTTCCCTCTTTATCTTCTTCATCTGTCGTAAATGGCCCTTCTCATGAGGAT
TAA

Peptide Sequence

PEP ID

XP_016484925.1
PEP Infomation

PREDICTED: chloroplast sensor kinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MLLSAFPPQNPLPLSNPTHPHPPPPHHHQHTLLFSPTFQKKATTVTHASSQRLPPLALTT
AAATSSTYTSLRHVSGTCSDDDSHGDGDGMVSSASAVAAAIRNASTSPVEFVQRIEKDDG
GLVLPSADFKRLCVEQFDLFRRIVHPQSVLSVYVRPAGSYVMDQLELRRITLHPHVNATD
LVILTGNFSIPAGLRAAEAALSRQEAELLPELGAMVFPMVKHPFIVGFLVAELPRTAFDK
GGFNVKAWPGQEEFYSLPPSMDLKSLNIQTSTDHSFEMLKFTAEQRLNAINISRSLAMAY
VMDQKAILLQQSTWQNNIRMSNLVEQIRGSLSSIRTLSKMLSSQIRKSEISYDIVQDILE
QGDCLSDTLKGLQDAVSLTKANIMRYSEETLKKMPKSTHPGRESVRSQLSSNLSEKLESL
SLKSKDLEMPMPPLALAPLHQEGIRPCSVSDVLVDLVGAVAPLAHEQRRAVLLSEVPRSL
QVPIEEPALRQALGNLIEGALLRIQAGGKVEIVATGAPAGGALVIIDDDGLDMHYMTQMH
SLAPFGADLFSEDKVEDNMTWNFVAGLTVSREILESYGCVVRVISPRLTDAAIGTGGTRI
ELWFPSLSSSSVVNGPSHED

Transcript Sequence

Gene sequence data has not been registered.